BISON Software Project

This is the site of the BISON software project. It was started in connection with the journal paper submission to Source Code for Biology and Medicine (SCFBM).

• BISON 1.0 Material for SCFBM submission
• Current BISON version: 1.0.0 (2006.11.27a)
  • F.A.Q.
  • How to tutorials

What is BISON?

BISON is a Java software interface for the analysis of biological networks. It combines seach of global patterns made up of frequent structures and properties with localized network context. Modern graph visualization is used to give perspective of interesting patterns discovered with the use of a pattern mining engine.

Screenshot and quick overview: What is BISON?

Citing BISON

To give credit for using BISON or an extension of BISON in your work, please cite the following manuscript. The authors would also like to know if you have found BISON useful for your work.

Besemann, C., Denton, A., Carr, N.J., and Prüß, B.M. BISON: A Bio- Interface for the Semi-global analysis Of Network patterns. Source Code for Biology and Medicine, 1:8 (29 November 2006). (SCFBM link) (doi:10.1186/1751-0473-1-8)